Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm8503-201ENSMUST00000118131 455 ntBASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav19A0A0B4J1K4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav19A0A0B4J1K4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav19A0A0B4J1K4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav19A0A0B4J1K4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav19A0A0B4J1K4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav19A0A0B4J1K4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav19A0A0B4J1K4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav19A0A0B4J1K4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav19A0A0B4J1K4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav19A0A0B4J1K4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav19A0A0B4J1K4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav19A0A0B4J1K4 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Gm45364-201ENSMUST00000210883 159 ntBASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav19A0A0B4J1K4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav19A0A0B4J1K4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav19A0A0B4J1K4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav19A0A0B4J1K4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav19A0A0B4J1K4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav19A0A0B4J1K4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav19A0A0B4J1K4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav19A0A0B4J1K4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav19A0A0B4J1K4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav19A0A0B4J1K4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav19A0A0B4J1K4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav19A0A0B4J1K4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav19A0A0B4J1K4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav19A0A0B4J1K4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav19A0A0B4J1K4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.9■□□□□ 0.14
Trav19A0A0B4J1K4 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.9■□□□□ 0.14
Trav19A0A0B4J1K4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav19A0A0B4J1K4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms