Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-4A0A0A6YXF1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.92■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.9■□□□□ 0.46
Ighv3-4A0A0A6YXF1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.9■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Gm12821-201ENSMUST00000120022 600 ntBASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-4A0A0A6YXF1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.88■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.86■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv3-4A0A0A6YXF1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv3-4A0A0A6YXF1 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms