Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ighv1-20A0A0A6YX66 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-20A0A0A6YX66 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-20A0A0A6YX66 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-20A0A0A6YX66 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-20A0A0A6YX66 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-20A0A0A6YX66 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-20A0A0A6YX66 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-20A0A0A6YX66 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ighv1-20A0A0A6YX66 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-20A0A0A6YX66 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-20A0A0A6YX66 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-20A0A0A6YX66 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-20A0A0A6YX66 Rps24-207ENSMUST00000224568 714 ntBASIC17.33■□□□□ 0.36
Ighv1-20A0A0A6YX66 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Ighv1-20A0A0A6YX66 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-20A0A0A6YX66 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ighv1-20A0A0A6YX66 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-20A0A0A6YX66 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-20A0A0A6YX66 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-20A0A0A6YX66 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-20A0A0A6YX66 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-20A0A0A6YX66 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-20A0A0A6YX66 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-20A0A0A6YX66 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-20A0A0A6YX66 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-20A0A0A6YX66 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-20A0A0A6YX66 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-20A0A0A6YX66 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.27■□□□□ 0.36
Ighv1-20A0A0A6YX66 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.27■□□□□ 0.36
Ighv1-20A0A0A6YX66 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.27■□□□□ 0.36
Ighv1-20A0A0A6YX66 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-20A0A0A6YX66 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-20A0A0A6YX66 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-20A0A0A6YX66 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-20A0A0A6YX66 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-20A0A0A6YX66 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gm45102-201ENSMUST00000207427 857 ntBASIC17.25■□□□□ 0.35
Ighv1-20A0A0A6YX66 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-20A0A0A6YX66 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-20A0A0A6YX66 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-20A0A0A6YX66 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms