Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-9A0A0A6YW37 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.13■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.13■□□□□ 0.17
Ighv1-9A0A0A6YW37 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-9A0A0A6YW37 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-9A0A0A6YW37 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-9A0A0A6YW37 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-9A0A0A6YW37 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv1-9A0A0A6YW37 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
Ighv1-9A0A0A6YW37 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv1-9A0A0A6YW37 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-9A0A0A6YW37 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-9A0A0A6YW37 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-9A0A0A6YW37 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.05■□□□□ 0.16
Ighv1-9A0A0A6YW37 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.04■□□□□ 0.16
Ighv1-9A0A0A6YW37 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-9A0A0A6YW37 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms