Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav21-dv12A0A075B6C4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav21-dv12A0A075B6C4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav21-dv12A0A075B6C4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav21-dv12A0A075B6C4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav21-dv12A0A075B6C4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav21-dv12A0A075B6C4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav21-dv12A0A075B6C4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav21-dv12A0A075B6C4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav21-dv12A0A075B6C4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav21-dv12A0A075B6C4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav21-dv12A0A075B6C4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 Gm27502-201ENSMUST00000183495 199 ntBASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav21-dv12A0A075B6C4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms