Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav18A0A075B656 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav18A0A075B656 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav18A0A075B656 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav18A0A075B656 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.53■□□□□ 0.4
Trav18A0A075B656 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav18A0A075B656 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav18A0A075B656 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav18A0A075B656 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav18A0A075B656 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav18A0A075B656 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.52■□□□□ 0.4
Trav18A0A075B656 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.52■□□□□ 0.4
Trav18A0A075B656 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav18A0A075B656 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.52■□□□□ 0.4
Trav18A0A075B656 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav18A0A075B656 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trav18A0A075B656 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav18A0A075B656 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trav18A0A075B656 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav18A0A075B656 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav18A0A075B656 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.51■□□□□ 0.39
Trav18A0A075B656 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav18A0A075B656 Gm11687-201ENSMUST00000118911 886 ntBASIC17.5■□□□□ 0.39
Trav18A0A075B656 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Trav18A0A075B656 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav18A0A075B656 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.5■□□□□ 0.39
Trav18A0A075B656 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav18A0A075B656 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.49■□□□□ 0.39
Trav18A0A075B656 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav18A0A075B656 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.49■□□□□ 0.39
Trav18A0A075B656 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Trav18A0A075B656 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav18A0A075B656 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav18A0A075B656 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trav18A0A075B656 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav18A0A075B656 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav18A0A075B656 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav18A0A075B656 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav18A0A075B656 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav18A0A075B656 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav18A0A075B656 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav18A0A075B656 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Trav18A0A075B656 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.45■□□□□ 0.38
Trav18A0A075B656 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav18A0A075B656 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav18A0A075B656 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.44■□□□□ 0.38
Trav18A0A075B656 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav18A0A075B656 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav18A0A075B656 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms