Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav16A0A075B653 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav16A0A075B653 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav16A0A075B653 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16A0A075B653 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav16A0A075B653 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16A0A075B653 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16A0A075B653 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16A0A075B653 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.47■□□□□ 0.23
Trav16A0A075B653 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16A0A075B653 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
Trav16A0A075B653 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16A0A075B653 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.47■□□□□ 0.23
Trav16A0A075B653 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16A0A075B653 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav16A0A075B653 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav16A0A075B653 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav16A0A075B653 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.46■□□□□ 0.23
Trav16A0A075B653 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.46■□□□□ 0.23
Trav16A0A075B653 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav16A0A075B653 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav16A0A075B653 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav16A0A075B653 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav16A0A075B653 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Trav16A0A075B653 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav16A0A075B653 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Iqck-206ENSMUST00000208658 2891 ntBASIC16.45■□□□□ 0.22
Trav16A0A075B653 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.45■□□□□ 0.22
Trav16A0A075B653 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.45■□□□□ 0.22
Trav16A0A075B653 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16A0A075B653 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav16A0A075B653 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16A0A075B653 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trav16A0A075B653 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.44■□□□□ 0.22
Trav16A0A075B653 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16A0A075B653 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16A0A075B653 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16A0A075B653 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16A0A075B653 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Gm4799-201ENSMUST00000095396 657 ntBASIC16.43■□□□□ 0.22
Trav16A0A075B653 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.43■□□□□ 0.22
Trav16A0A075B653 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav16A0A075B653 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav16A0A075B653 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.42■□□□□ 0.22
Trav16A0A075B653 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav16A0A075B653 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav16A0A075B653 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav16A0A075B653 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav16A0A075B653 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav16A0A075B653 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Trav16A0A075B653 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav16A0A075B653 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16A0A075B653 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16A0A075B653 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16A0A075B653 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav16A0A075B653 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.41■□□□□ 0.22
Trav16A0A075B653 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16A0A075B653 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.41■□□□□ 0.22
Trav16A0A075B653 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16A0A075B653 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16A0A075B653 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav16A0A075B653 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16A0A075B653 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16A0A075B653 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16A0A075B653 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16A0A075B653 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16A0A075B653 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16A0A075B653 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16A0A075B653 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav16A0A075B653 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16A0A075B653 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16A0A075B653 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16A0A075B653 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav16A0A075B653 Gm9812-201ENSMUST00000061934 968 ntBASIC16.39■□□□□ 0.21
Trav16A0A075B653 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16A0A075B653 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16A0A075B653 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16A0A075B653 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav16A0A075B653 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav16A0A075B653 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav16A0A075B653 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms