Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16d-dv11A0A075B617 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav16d-dv11A0A075B617 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Trav16d-dv11A0A075B617 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16d-dv11A0A075B617 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16d-dv11A0A075B617 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16d-dv11A0A075B617 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Iqck-206ENSMUST00000208658 2891 ntBASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16d-dv11A0A075B617 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16d-dv11A0A075B617 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16d-dv11A0A075B617 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16d-dv11A0A075B617 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16d-dv11A0A075B617 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16d-dv11A0A075B617 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16d-dv11A0A075B617 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16d-dv11A0A075B617 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16d-dv11A0A075B617 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16d-dv11A0A075B617 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16d-dv11A0A075B617 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16d-dv11A0A075B617 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav16d-dv11A0A075B617 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16d-dv11A0A075B617 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16d-dv11A0A075B617 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav16d-dv11A0A075B617 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16d-dv11A0A075B617 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav16d-dv11A0A075B617 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms