Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-1A0A075B601 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-1A0A075B601 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-1A0A075B601 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-1A0A075B601 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.69■□□□□ 0.26
Trav9-1A0A075B601 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Trav9-1A0A075B601 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav9-1A0A075B601 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav9-1A0A075B601 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9-1A0A075B601 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9-1A0A075B601 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9-1A0A075B601 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav9-1A0A075B601 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav9-1A0A075B601 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-1A0A075B601 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-1A0A075B601 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav9-1A0A075B601 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-1A0A075B601 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav9-1A0A075B601 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-1A0A075B601 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-1A0A075B601 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav9-1A0A075B601 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav9-1A0A075B601 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-1A0A075B601 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-1A0A075B601 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-1A0A075B601 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-1A0A075B601 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav9-1A0A075B601 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9-1A0A075B601 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9-1A0A075B601 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9-1A0A075B601 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9-1A0A075B601 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9-1A0A075B601 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav9-1A0A075B601 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav9-1A0A075B601 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Trav9-1A0A075B601 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms