Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Gm5161-201ENSMUST00000075243 853 ntBASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cldn9Q9Z0S7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Syt7-204ENSMUST00000223586 1344 ntBASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Mir874-201ENSMUST00000104769 76 ntBASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gm15678-201ENSMUST00000117573 960 ntBASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gm15321-201ENSMUST00000121290 288 ntBASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gm28760-201ENSMUST00000185995 736 ntBASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gm43094-201ENSMUST00000196549 921 ntBASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn9Q9Z0S7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms