Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcf1Q9QZM3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Mir698-201ENSMUST00000102164 109 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm11524-201ENSMUST00000119349 807 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm28911-201ENSMUST00000188837 117 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm43094-201ENSMUST00000196549 921 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcf1Q9QZM3 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcf1Q9QZM3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clcf1Q9QZM3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms