Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Gm27622-201ENSMUST00000183779 60 ntBASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1aQ9QWF0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1aQ9QWF0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Gm15693-201ENSMUST00000120470 637 ntBASIC15.08■□□□□ 0
Chaf1aQ9QWF0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1aQ9QWF0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1aQ9QWF0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.07■□□□□ 0
Chaf1aQ9QWF0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1aQ9QWF0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1aQ9QWF0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chaf1aQ9QWF0 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.07■□□□□ 0
Chaf1aQ9QWF0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.07■□□□□ 0
Chaf1aQ9QWF0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms