Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Crlf1Q9JM58 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.77□□□□□ -0.69
Crlf1Q9JM58 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Crlf1Q9JM58 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Crlf1Q9JM58 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Crlf1Q9JM58 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Crlf1Q9JM58 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Crlf1Q9JM58 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gm9083-201ENSMUST00000120423 819 ntBASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gm16479-201ENSMUST00000121706 932 ntBASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gm44069-201ENSMUST00000204898 506 ntBASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Crlf1Q9JM58 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Gm16202-201ENSMUST00000117532 544 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Gm13570-201ENSMUST00000140763 309 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Gm26185-201ENSMUST00000157692 266 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Mir1943-201ENSMUST00000158276 73 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Crlf1Q9JM58 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms