Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gm38294-201ENSMUST00000192831 381 ntBASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gm18041-201ENSMUST00000218210 618 ntBASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl28Q9JIL2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Gm4804-201ENSMUST00000182234 999 ntBASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl28Q9JIL2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ccl28Q9JIL2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl28Q9JIL2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl28Q9JIL2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl28Q9JIL2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl28Q9JIL2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms