Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.63□□□□□ -0.39
Trim39Q9ESN2 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm25144-201ENSMUST00000179561 110 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm25352-201ENSMUST00000179815 110 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm27533-201ENSMUST00000183800 152 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm36991-201ENSMUST00000191800 648 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Shd-206ENSMUST00000225145 998 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim39Q9ESN2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm38294-201ENSMUST00000192831 381 ntBASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm6916-202ENSMUST00000205523 195 ntBASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim39Q9ESN2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms