Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.9□□□□□ -0.34
Ube4bQ9ES00 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Gm5177-201ENSMUST00000183092 997 ntBASIC12.9□□□□□ -0.34
Ube4bQ9ES00 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.9□□□□□ -0.34
Ube4bQ9ES00 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ube4bQ9ES00 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ube4bQ9ES00 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Gm16198-201ENSMUST00000118766 670 ntBASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Gm1401-201ENSMUST00000122048 772 ntBASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ube4bQ9ES00 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms