Protein–RNA interactions for Protein: Q9ER65

Clstn2, Calsyntenin-2, mousemouse

Predictions only

Length 966 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn2Q9ER65 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm9431-201ENSMUST00000119765 1051 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm11658-201ENSMUST00000120913 1008 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm6161-201ENSMUST00000121942 1102 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm5637-201ENSMUST00000153890 1119 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm6254-201ENSMUST00000168178 1072 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm6153-201ENSMUST00000172004 1058 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Mospd4-201ENSMUST00000180618 576 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm2467-201ENSMUST00000182266 1010 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm6981-201ENSMUST00000182467 1008 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gm5641-202ENSMUST00000198699 1080 ntBASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clstn2Q9ER65 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Gm6458-201ENSMUST00000211573 635 ntBASIC19.23■□□□□ 0.67
Clstn2Q9ER65 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clstn2Q9ER65 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Gm15897-201ENSMUST00000117770 1486 ntBASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Gm10729-202ENSMUST00000193403 1375 ntBASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Gm5896-201ENSMUST00000189662 1024 ntBASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clstn2Q9ER65 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Gm27243-201ENSMUST00000183964 521 ntBASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Gm37489-201ENSMUST00000191883 159 ntBASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clstn2Q9ER65 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms