Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Gm14140-201ENSMUST00000119999 995 ntBASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Gm18733-201ENSMUST00000173950 856 ntBASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Gm5177-201ENSMUST00000183092 997 ntBASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Thap2-203ENSMUST00000218989 527 ntBASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Mzt1-203ENSMUST00000227948 952 ntBASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hmgn3Q9DCB1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Mir698-201ENSMUST00000102164 109 ntBASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 BC001981-202ENSMUST00000191393 1545 ntBASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms