Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Gm5177-201ENSMUST00000183092 997 ntBASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.6□□□□□ -0.23
Sf3a3Q9D554 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Gm7461-201ENSMUST00000058918 827 ntBASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3a3Q9D554 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Gm7862-201ENSMUST00000121461 292 ntBASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Gm28033-201ENSMUST00000184224 96 ntBASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3a3Q9D554 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.58□□□□□ -0.23
Sf3a3Q9D554 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sf3a3Q9D554 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sf3a3Q9D554 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sf3a3Q9D554 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sf3a3Q9D554 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.58□□□□□ -0.24
Sf3a3Q9D554 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms