Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lysmd1Q9D0E3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Daam2-202ENSMUST00000224595 1926 ntBASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Gm11246-201ENSMUST00000120880 345 ntBASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd1Q9D0E3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Gm37201-201ENSMUST00000191845 523 ntBASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd1Q9D0E3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Gm14219-201ENSMUST00000120414 288 ntBASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Gm45527-201ENSMUST00000211052 774 ntBASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms