Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Gm27631-201ENSMUST00000184163 466 ntBASIC14.09□□□□□ -0.15
RpainQ9CWY9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Gm9182-201ENSMUST00000217829 639 ntBASIC14.09□□□□□ -0.15
RpainQ9CWY9 Gm16476-201ENSMUST00000221544 139 ntBASIC14.09□□□□□ -0.15
RpainQ9CWY9 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.09□□□□□ -0.15
RpainQ9CWY9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.09□□□□□ -0.15
RpainQ9CWY9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RpainQ9CWY9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RpainQ9CWY9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RpainQ9CWY9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.08□□□□□ -0.16
RpainQ9CWY9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RpainQ9CWY9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.07□□□□□ -0.16
RpainQ9CWY9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RpainQ9CWY9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms