Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.09■□□□□ 0.01
Smc1aQ9CU62 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.08■□□□□ 0.01
Smc1aQ9CU62 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1aQ9CU62 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1aQ9CU62 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1aQ9CU62 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1aQ9CU62 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.08■□□□□ 0
Smc1aQ9CU62 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.08■□□□□ 0
Smc1aQ9CU62 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Gm18062-201ENSMUST00000208020 547 ntBASIC15.08■□□□□ 0
Smc1aQ9CU62 Gm18055-201ENSMUST00000208254 547 ntBASIC15.08■□□□□ 0
Smc1aQ9CU62 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.08■□□□□ 0
Smc1aQ9CU62 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smc1aQ9CU62 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1aQ9CU62 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smc1aQ9CU62 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Gm15824-201ENSMUST00000119516 955 ntBASIC15.07■□□□□ 0
Smc1aQ9CU62 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.07■□□□□ 0
Smc1aQ9CU62 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.07■□□□□ 0
Smc1aQ9CU62 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.07■□□□□ 0
Smc1aQ9CU62 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.07■□□□□ 0
Smc1aQ9CU62 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1aQ9CU62 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Smc1aQ9CU62 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.06■□□□□ 0
Smc1aQ9CU62 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1aQ9CU62 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1aQ9CU62 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1aQ9CU62 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1aQ9CU62 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smc1aQ9CU62 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc1aQ9CU62 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smc1aQ9CU62 Gm15460-201ENSMUST00000118147 391 ntBASIC15.06■□□□□ 0
Smc1aQ9CU62 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.06■□□□□ 0
Smc1aQ9CU62 Gm13829-201ENSMUST00000119600 138 ntBASIC15.06■□□□□ 0
Smc1aQ9CU62 Gm15806-201ENSMUST00000120696 955 ntBASIC15.06■□□□□ 0
Smc1aQ9CU62 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms