Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm15920-201ENSMUST00000118998 402 ntBASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim11Q99PQ2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.05
Trim11Q99PQ2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Gm15678-201ENSMUST00000117573 960 ntBASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Gm12151-201ENSMUST00000121374 290 ntBASIC15.33■□□□□ 0.04
Trim11Q99PQ2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim11Q99PQ2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Gm29667-201ENSMUST00000190817 490 ntBASIC15.32■□□□□ 0.04
Trim11Q99PQ2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms