Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.41□□□□□ -0.26
Trim33Q99PP7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim33Q99PP7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Gm5866-201ENSMUST00000177881 973 ntBASIC13.4□□□□□ -0.26
Trim33Q99PP7 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.4□□□□□ -0.26
Trim33Q99PP7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim33Q99PP7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trim33Q99PP7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim33Q99PP7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.39□□□□□ -0.27
Trim33Q99PP7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.39□□□□□ -0.27
Trim33Q99PP7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.39□□□□□ -0.27
Trim33Q99PP7 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.39□□□□□ -0.27
Trim33Q99PP7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.39□□□□□ -0.27
Trim33Q99PP7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms