Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gtf2a1Q99PM3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Gtf2a1Q99PM3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Gm8344-201ENSMUST00000119813 856 ntBASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Gm38292-201ENSMUST00000192646 3045 ntBASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Gtf2a1Q99PM3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Gm35960-201ENSMUST00000202712 767 ntBASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Gm9987-201ENSMUST00000069768 567 ntBASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms