Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm7809-201ENSMUST00000153199 742 ntBASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm42790-201ENSMUST00000201268 969 ntBASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm21769-201ENSMUST00000211922 111 ntBASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx6-1Q99MA9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Gm27341-201ENSMUST00000183570 106 ntBASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx6-1Q99MA9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms