Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.2□□□□□ -0.14
Usp11Q99K46 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Usp11Q99K46 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.2□□□□□ -0.14
Usp11Q99K46 Gm29667-201ENSMUST00000190817 490 ntBASIC14.2□□□□□ -0.14
Usp11Q99K46 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.2□□□□□ -0.14
Usp11Q99K46 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.2□□□□□ -0.14
Usp11Q99K46 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp11Q99K46 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp11Q99K46 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp11Q99K46 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usp11Q99K46 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Syt7-204ENSMUST00000223586 1344 ntBASIC14.19□□□□□ -0.14
Usp11Q99K46 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp11Q99K46 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp11Q99K46 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp11Q99K46 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp11Q99K46 Gm24694-201ENSMUST00000180054 110 ntBASIC14.19□□□□□ -0.14
Usp11Q99K46 Gm27663-201ENSMUST00000184839 110 ntBASIC14.19□□□□□ -0.14
Usp11Q99K46 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Gm10766-202ENSMUST00000194123 606 ntBASIC14.19□□□□□ -0.14
Usp11Q99K46 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp11Q99K46 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Usp11Q99K46 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp11Q99K46 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.18□□□□□ -0.14
Usp11Q99K46 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Usp11Q99K46 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Usp11Q99K46 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.18□□□□□ -0.14
Usp11Q99K46 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp11Q99K46 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Gm4804-201ENSMUST00000182234 999 ntBASIC14.18□□□□□ -0.14
Usp11Q99K46 Mir6977-201ENSMUST00000184960 64 ntBASIC14.18□□□□□ -0.14
Usp11Q99K46 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.18□□□□□ -0.14
Usp11Q99K46 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Usp11Q99K46 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp11Q99K46 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.17□□□□□ -0.14
Usp11Q99K46 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms