Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Gm42480-201ENSMUST00000198434 2595 ntBASIC12□□□□□ -0.49
Thumpd1Q99J36 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12□□□□□ -0.49
Thumpd1Q99J36 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Gm16476-201ENSMUST00000221544 139 ntBASIC12□□□□□ -0.49
Thumpd1Q99J36 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12□□□□□ -0.49
Thumpd1Q99J36 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thumpd1Q99J36 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd1Q99J36 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm15770-201ENSMUST00000117498 584 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm13385-201ENSMUST00000121089 220 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm11745-201ENSMUST00000121669 448 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm12260-201ENSMUST00000122447 411 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm24420-201ENSMUST00000176676 59 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm4804-201ENSMUST00000182234 999 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Mir7221-201ENSMUST00000184009 72 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thumpd1Q99J36 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thumpd1Q99J36 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms