Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gm3436-201ENSMUST00000179930 840 ntBASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gm27321-201ENSMUST00000185021 205 ntBASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gm10766-202ENSMUST00000194123 606 ntBASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gm43703-201ENSMUST00000200523 763 ntBASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Gm13453-201ENSMUST00000118708 357 ntBASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Gm13385-201ENSMUST00000121089 220 ntBASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Gm27680-201ENSMUST00000184192 160 ntBASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb4Q91XZ6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb4Q91XZ6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb4Q91XZ6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb4Q91XZ6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb4Q91XZ6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms