Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm5867-201ENSMUST00000063197 592 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.28□□□□□ -0.6
H1fooQ8VIK3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm15240-201ENSMUST00000118156 720 ntBASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm27306-201ENSMUST00000183970 107 ntBASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm27989-201ENSMUST00000184721 107 ntBASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm27772-201ENSMUST00000184900 187 ntBASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm44872-201ENSMUST00000207864 420 ntBASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H1fooQ8VIK3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H1fooQ8VIK3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Gm9522-201ENSMUST00000182394 926 ntBASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.27□□□□□ -0.61
H1fooQ8VIK3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H1fooQ8VIK3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms