Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn1Q8K445 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn1Q8K445 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Clrn1Q8K445 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn1Q8K445 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Clrn1Q8K445 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn1Q8K445 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.71□□□□□ -0.38
Clrn1Q8K445 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Gm12859-201ENSMUST00000117834 427 ntBASIC12.7□□□□□ -0.38
Clrn1Q8K445 Gm15376-201ENSMUST00000122258 783 ntBASIC12.7□□□□□ -0.38
Clrn1Q8K445 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.7□□□□□ -0.38
Clrn1Q8K445 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.7□□□□□ -0.38
Clrn1Q8K445 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn1Q8K445 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.69□□□□□ -0.38
Clrn1Q8K445 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Gm26464-201ENSMUST00000157094 305 ntBASIC12.69□□□□□ -0.38
Clrn1Q8K445 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Gm28631-201ENSMUST00000190740 334 ntBASIC12.69□□□□□ -0.38
Clrn1Q8K445 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.69□□□□□ -0.38
Clrn1Q8K445 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clrn1Q8K445 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms