Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shtn1Q8K2Q9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shtn1Q8K2Q9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Rps4l-202ENSMUST00000204242 789 ntBASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Gm5363-201ENSMUST00000211927 938 ntBASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shtn1Q8K2Q9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.79■□□□□ 0.12
Shtn1Q8K2Q9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms