Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Gm14017-201ENSMUST00000121934 386 ntBASIC15.15■□□□□ 0.02
Syne4Q8CII8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Gm24990-201ENSMUST00000157406 323 ntBASIC15.15■□□□□ 0.02
Syne4Q8CII8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Gm30285-201ENSMUST00000214614 422 ntBASIC15.15■□□□□ 0.02
Syne4Q8CII8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.15■□□□□ 0.02
Syne4Q8CII8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Gm26956-201ENSMUST00000182176 986 ntBASIC15.14■□□□□ 0.01
Syne4Q8CII8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.14■□□□□ 0.01
Syne4Q8CII8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syne4Q8CII8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.13■□□□□ 0.01
Syne4Q8CII8 Gm12502-201ENSMUST00000120197 444 ntBASIC15.13■□□□□ 0.01
Syne4Q8CII8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Gm17208-201ENSMUST00000168388 535 ntBASIC15.13■□□□□ 0.01
Syne4Q8CII8 Gm37042-201ENSMUST00000193816 581 ntBASIC15.13■□□□□ 0.01
Syne4Q8CII8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Gm45186-201ENSMUST00000206874 478 ntBASIC15.13■□□□□ 0.01
Syne4Q8CII8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms