Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Gm5425-201ENSMUST00000214125 459 ntBASIC13.76□□□□□ -0.21
CopaQ8CIE6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.76□□□□□ -0.21
CopaQ8CIE6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.76□□□□□ -0.21
CopaQ8CIE6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopaQ8CIE6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.75□□□□□ -0.21
CopaQ8CIE6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CopaQ8CIE6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Gm15678-201ENSMUST00000117573 960 ntBASIC13.75□□□□□ -0.21
CopaQ8CIE6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.75□□□□□ -0.21
CopaQ8CIE6 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.75□□□□□ -0.21
CopaQ8CIE6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.75□□□□□ -0.21
CopaQ8CIE6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.74□□□□□ -0.21
CopaQ8CIE6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.74□□□□□ -0.21
CopaQ8CIE6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CopaQ8CIE6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms