Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm10698-201ENSMUST00000182663 604 ntBASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hist3h2bbQ8CGP0 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Mir874-201ENSMUST00000104769 76 ntBASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm15678-201ENSMUST00000117573 960 ntBASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm37230-201ENSMUST00000194491 818 ntBASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hist3h2bbQ8CGP0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 BC043934-202ENSMUST00000185694 2356 ntBASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hist3h2bbQ8CGP0 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms