Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ShfQ8CG80 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.02□□□□□ -0.49
ShfQ8CG80 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
ShfQ8CG80 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.02□□□□□ -0.49
ShfQ8CG80 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ShfQ8CG80 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.01□□□□□ -0.49
ShfQ8CG80 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ShfQ8CG80 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ShfQ8CG80 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.01□□□□□ -0.49
ShfQ8CG80 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ShfQ8CG80 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12□□□□□ -0.49
ShfQ8CG80 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ShfQ8CG80 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12□□□□□ -0.49
ShfQ8CG80 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12□□□□□ -0.49
ShfQ8CG80 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ShfQ8CG80 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ShfQ8CG80 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12□□□□□ -0.49
ShfQ8CG80 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12□□□□□ -0.49
ShfQ8CG80 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ShfQ8CG80 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ShfQ8CG80 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12□□□□□ -0.49
ShfQ8CG80 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
ShfQ8CG80 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
ShfQ8CG80 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12□□□□□ -0.49
ShfQ8CG80 Gm42690-201ENSMUST00000197921 1836 ntBASIC12□□□□□ -0.49
ShfQ8CG80 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12□□□□□ -0.49
ShfQ8CG80 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ShfQ8CG80 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ShfQ8CG80 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms