Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps53Q8CCB4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Gm15678-201ENSMUST00000117573 960 ntBASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Gm5279-201ENSMUST00000199575 745 ntBASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Vps53Q8CCB4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Gm5356-201ENSMUST00000093326 615 ntBASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps53Q8CCB4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Gm4804-201ENSMUST00000182234 999 ntBASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Gm21470-201ENSMUST00000187680 696 ntBASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Gm18307-201ENSMUST00000206864 949 ntBASIC15.64■□□□□ 0.09
Vps53Q8CCB4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms