Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.56■□□□□ 0.08
Shisa4Q8CA71 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Gm27331-201ENSMUST00000183705 60 ntBASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Gm18827-201ENSMUST00000188341 790 ntBASIC15.55■□□□□ 0.08
Shisa4Q8CA71 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.55■□□□□ 0.08
Shisa4Q8CA71 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Gm17794-201ENSMUST00000220252 955 ntBASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa4Q8CA71 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Olfr582-201ENSMUST00000098212 960 ntBASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa4Q8CA71 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Gm22331-201ENSMUST00000158066 136 ntBASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Gm45784-201ENSMUST00000188360 142 ntBASIC15.53■□□□□ 0.08
Shisa4Q8CA71 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.53■□□□□ 0.08
Shisa4Q8CA71 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa4Q8CA71 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms