Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim9Q8C7M3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trim9Q8C7M3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trim9Q8C7M3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim9Q8C7M3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim9Q8C7M3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim9Q8C7M3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim9Q8C7M3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm12859-201ENSMUST00000117834 427 ntBASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms