Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Gm10576-201ENSMUST00000191927 825 ntBASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trub1Q8C0D0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Gm28631-201ENSMUST00000190740 334 ntBASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Gm19220-201ENSMUST00000222682 803 ntBASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trub1Q8C0D0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms