Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Mir1943-201ENSMUST00000158276 73 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm26361-201ENSMUST00000158868 186 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm20426-201ENSMUST00000173657 440 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm43378-201ENSMUST00000199336 582 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Gm23363-201ENSMUST00000175024 79 ntBASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Gm44100-201ENSMUST00000204329 436 ntBASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Gm8385-201ENSMUST00000058999 643 ntBASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Gm22058-201ENSMUST00000083393 310 ntBASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col16a1Q8BLX7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 AC131330.1-201ENSMUST00000227814 1015 ntBASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col16a1Q8BLX7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Gm13736-201ENSMUST00000119272 253 ntBASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col16a1Q8BLX7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms