Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gm13385-201ENSMUST00000121089 220 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2bQ8BJF9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gm15693-201ENSMUST00000120470 637 ntBASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gm5312-201ENSMUST00000203728 547 ntBASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms