Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Gm15371-201ENSMUST00000117057 784 ntBASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Prpf40bQ80W14 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gm22018-201ENSMUST00000104357 131 ntBASIC15.51■□□□□ 0.07
Prpf40bQ80W14 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gm37008-201ENSMUST00000195712 319 ntBASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gm44397-201ENSMUST00000195950 113 ntBASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.51■□□□□ 0.07
Prpf40bQ80W14 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.51■□□□□ 0.07
Prpf40bQ80W14 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40bQ80W14 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40bQ80W14 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40bQ80W14 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms