Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm12138-201ENSMUST00000122180 951 ntBASIC13.91□□□□□ -0.18
Trim62Q80V85 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim62Q80V85 Gm27892-201ENSMUST00000185017 106 ntBASIC13.91□□□□□ -0.18
Trim62Q80V85 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Gm38671-201ENSMUST00000200573 130 ntBASIC13.91□□□□□ -0.18
Trim62Q80V85 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim62Q80V85 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.91□□□□□ -0.18
Trim62Q80V85 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Gm16372-201ENSMUST00000073088 450 ntBASIC13.91□□□□□ -0.18
Trim62Q80V85 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim62Q80V85 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.91□□□□□ -0.18
Trim62Q80V85 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim62Q80V85 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.9□□□□□ -0.18
Trim62Q80V85 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.9□□□□□ -0.18
Trim62Q80V85 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm6244-201ENSMUST00000178732 841 ntBASIC13.9□□□□□ -0.18
Trim62Q80V85 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim62Q80V85 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim62Q80V85 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim62Q80V85 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trim62Q80V85 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trim62Q80V85 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim62Q80V85 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim62Q80V85 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim62Q80V85 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Gm13612-201ENSMUST00000119276 390 ntBASIC13.89□□□□□ -0.19
Trim62Q80V85 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim62Q80V85 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim62Q80V85 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trim62Q80V85 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trim62Q80V85 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms