Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Gm19184-201ENSMUST00000196798 928 ntBASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NfrkbQ6PIJ4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm15770-201ENSMUST00000117498 584 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm1335-201ENSMUST00000121653 386 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm27682-201ENSMUST00000183930 110 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm45880-201ENSMUST00000213041 853 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfrkbQ6PIJ4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gm26315-201ENSMUST00000083890 321 ntBASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfrkbQ6PIJ4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfrkbQ6PIJ4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfrkbQ6PIJ4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfrkbQ6PIJ4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NfrkbQ6PIJ4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfrkbQ6PIJ4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfrkbQ6PIJ4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfrkbQ6PIJ4 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms