Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Gm15770-201ENSMUST00000117498 584 ntBASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Gm12485-201ENSMUST00000119641 291 ntBASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Mir6392-201ENSMUST00000184924 108 ntBASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Gm7063-201ENSMUST00000186840 981 ntBASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Gm18624-201ENSMUST00000220966 658 ntBASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Gm14928-201ENSMUST00000120198 477 ntBASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Gm15376-201ENSMUST00000122258 783 ntBASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Gm23984-201ENSMUST00000157139 203 ntBASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Casc4Q6P2L7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.62□□□□□ -0.23
Casc4Q6P2L7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Gm12341-201ENSMUST00000119724 503 ntBASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms