Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.52■□□□□ 0.08
Scn9aQ62205 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.52■□□□□ 0.08
Scn9aQ62205 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.52■□□□□ 0.07
Scn9aQ62205 Gm13996-201ENSMUST00000118456 430 ntBASIC15.52■□□□□ 0.07
Scn9aQ62205 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.52■□□□□ 0.07
Scn9aQ62205 Gm13813-201ENSMUST00000120998 787 ntBASIC15.52■□□□□ 0.07
Scn9aQ62205 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.52■□□□□ 0.07
Scn9aQ62205 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.52■□□□□ 0.07
Scn9aQ62205 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Gm27438-201ENSMUST00000183480 110 ntBASIC15.52■□□□□ 0.07
Scn9aQ62205 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.52■□□□□ 0.07
Scn9aQ62205 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn9aQ62205 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Scn9aQ62205 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.51■□□□□ 0.07
Scn9aQ62205 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scn9aQ62205 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Gm27552-201ENSMUST00000183351 62 ntBASIC15.51■□□□□ 0.07
Scn9aQ62205 Gm27844-201ENSMUST00000183613 62 ntBASIC15.51■□□□□ 0.07
Scn9aQ62205 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.51■□□□□ 0.07
Scn9aQ62205 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.51■□□□□ 0.07
Scn9aQ62205 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Scn9aQ62205 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scn9aQ62205 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn9aQ62205 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scn9aQ62205 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.5■□□□□ 0.07
Scn9aQ62205 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Scn9aQ62205 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.5■□□□□ 0.07
Scn9aQ62205 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.5■□□□□ 0.07
Scn9aQ62205 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Scn9aQ62205 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.5■□□□□ 0.07
Scn9aQ62205 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scn9aQ62205 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.5■□□□□ 0.07
Scn9aQ62205 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.5■□□□□ 0.07
Scn9aQ62205 Gm7003-201ENSMUST00000195089 312 ntBASIC15.5■□□□□ 0.07
Scn9aQ62205 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.5■□□□□ 0.07
Scn9aQ62205 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Gm44545-201ENSMUST00000208262 746 ntBASIC15.5■□□□□ 0.07
Scn9aQ62205 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.5■□□□□ 0.07
Scn9aQ62205 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn9aQ62205 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Scn9aQ62205 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scn9aQ62205 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.49■□□□□ 0.07
Scn9aQ62205 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.49■□□□□ 0.07
Scn9aQ62205 Gm5904-201ENSMUST00000210286 865 ntBASIC15.49■□□□□ 0.07
Scn9aQ62205 Gm7848-201ENSMUST00000210739 718 ntBASIC15.49■□□□□ 0.07
Scn9aQ62205 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.49■□□□□ 0.07
Scn9aQ62205 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.49■□□□□ 0.07
Scn9aQ62205 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Scn9aQ62205 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Scn9aQ62205 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Scn9aQ62205 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn9aQ62205 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms