Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.32□□□□□ -0.44
VcanQ62059 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.32□□□□□ -0.44
VcanQ62059 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Gm44651-201ENSMUST00000207343 372 ntBASIC12.32□□□□□ -0.44
VcanQ62059 Gm32025-201ENSMUST00000217960 307 ntBASIC12.32□□□□□ -0.44
VcanQ62059 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.32□□□□□ -0.44
VcanQ62059 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Gm6630-201ENSMUST00000119199 454 ntBASIC12.32□□□□□ -0.44
VcanQ62059 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Gm45550-201ENSMUST00000209380 946 ntBASIC12.32□□□□□ -0.44
VcanQ62059 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.32□□□□□ -0.44
VcanQ62059 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.32□□□□□ -0.44
VcanQ62059 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
VcanQ62059 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.31□□□□□ -0.44
VcanQ62059 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.31□□□□□ -0.44
VcanQ62059 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm2546-201ENSMUST00000182630 991 ntBASIC12.31□□□□□ -0.44
VcanQ62059 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VcanQ62059 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.31□□□□□ -0.44
VcanQ62059 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.31□□□□□ -0.44
VcanQ62059 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
VcanQ62059 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
VcanQ62059 Gm21811-201ENSMUST00000096485 930 ntBASIC12.31□□□□□ -0.44
VcanQ62059 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VcanQ62059 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
VcanQ62059 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VcanQ62059 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.3□□□□□ -0.44
VcanQ62059 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.3□□□□□ -0.44
VcanQ62059 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.3□□□□□ -0.44
VcanQ62059 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VcanQ62059 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VcanQ62059 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VcanQ62059 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.3□□□□□ -0.44
VcanQ62059 Gm16202-201ENSMUST00000117532 544 ntBASIC12.3□□□□□ -0.44
VcanQ62059 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.3□□□□□ -0.44
VcanQ62059 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.3□□□□□ -0.44
VcanQ62059 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.3□□□□□ -0.44
VcanQ62059 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VcanQ62059 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VcanQ62059 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VcanQ62059 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.3□□□□□ -0.44
VcanQ62059 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Gm8768-201ENSMUST00000220020 826 ntBASIC12.3□□□□□ -0.44
VcanQ62059 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.3□□□□□ -0.44
VcanQ62059 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VcanQ62059 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcanQ62059 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms