Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Gm16570-201ENSMUST00000161951 436 ntBASIC10.36□□□□□ -0.75
Notch3Q61982 Gm4804-201ENSMUST00000182234 999 ntBASIC10.36□□□□□ -0.75
Notch3Q61982 Mir8109-201ENSMUST00000184375 117 ntBASIC10.36□□□□□ -0.75
Notch3Q61982 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.36□□□□□ -0.75
Notch3Q61982 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.36□□□□□ -0.75
Notch3Q61982 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.36□□□□□ -0.75
Notch3Q61982 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.36□□□□□ -0.75
Notch3Q61982 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.36□□□□□ -0.75
Notch3Q61982 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.36□□□□□ -0.75
Notch3Q61982 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Notch3Q61982 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Notch3Q61982 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Notch3Q61982 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm12384-201ENSMUST00000119228 919 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm26464-201ENSMUST00000157094 305 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Notch3Q61982 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm13350-201ENSMUST00000120519 479 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm29127-201ENSMUST00000188304 517 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.35□□□□□ -0.75
Notch3Q61982 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.35□□□□□ -0.75
Notch3Q61982 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Notch3Q61982 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.34□□□□□ -0.75
Notch3Q61982 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Notch3Q61982 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Notch3Q61982 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Notch3Q61982 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Notch3Q61982 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Notch3Q61982 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Notch3Q61982 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.34□□□□□ -0.75
Notch3Q61982 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Notch3Q61982 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Notch3Q61982 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.34□□□□□ -0.75
Notch3Q61982 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms