Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ecm1Q61508 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ecm1Q61508 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ecm1Q61508 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.8□□□□□ -0.04
Ecm1Q61508 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.79□□□□□ -0.04
Ecm1Q61508 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ecm1Q61508 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ecm1Q61508 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.78□□□□□ -0.04
Ecm1Q61508 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Gm10434-201ENSMUST00000101158 471 ntBASIC14.78□□□□□ -0.04
Ecm1Q61508 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Gm2383-201ENSMUST00000181461 807 ntBASIC14.78□□□□□ -0.04
Ecm1Q61508 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.78□□□□□ -0.04
Ecm1Q61508 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ecm1Q61508 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ecm1Q61508 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ecm1Q61508 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ecm1Q61508 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ecm1Q61508 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ecm1Q61508 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.77□□□□□ -0.04
Ecm1Q61508 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.77□□□□□ -0.04
Ecm1Q61508 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ecm1Q61508 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ecm1Q61508 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ecm1Q61508 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Ecm1Q61508 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.77□□□□□ -0.05
Ecm1Q61508 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms